Patient-derived organoids for precision oncology: a platform to facilitate clinical decision making
DOI: 10.1186/s12885-023-11078-9
Authors: Swati Chitrangi; Pooja Vaity; Aishwarya Jamdar; Shweta Bhatt
Step 1: iPSC/ESC maintainance
day 0 ~ 1 (duration missing in database; assumed 1 day)
culture “adherent” human PSC in “mTeSR”. For ECM, use “Matrigel” at “N/A” “N/A”.
Ideally, “PSC” should express “POU5F1”, “NANOG”, “SOX2”, “SSEA4”, “TRA-1-81”, “TRA-1-60”, “ALP” at the end of culture.
Step 2: mesoderm 1
day 1 ~ 2 (duration missing in database; assumed 1 day)
culture “adherent” human PSC in “N2B27 medium”. For ECM, use “Matrigel” at “N/A” “N/A”. Medium should contain factors shown in the following table.
| concentration | unit | |
|---|---|---|
| CHIR90021 | 8.0e-6 | mol/l |
| BMP4 | 2.5e-5 | g/l |
Step 3: endothelial 1
day 2 ~ 5
culture “adherent” human PSC in “StemPro-34 medium” for “3” days. For ECM, use “Matrigel” at “N/A” “N/A”. Medium should contain factors shown in the following table, and should be changed once in “3” days.
| concentration | unit | |
|---|---|---|
| VEGF | 3.0e-4 | g/l |
| SB431542 | 1.0e-5 | mol/l |
| forskolin | 2.0e-6 | mol/l |
Ideally, “EC” should express “PECAM1” at the end of culture.