Nod1-dependent NF-kB activation initiates hematopoietic stem cell specification in response to small Rho GTPases
DOI: 10.1038/s41467-023-43349-1
Authors: Xiaoyi Cheng; Radwa Barakat; Giulia Pavani; Masuma Khatun Usha; Rodolfo Calderon; Elizabeth Snella; Abigail Gorden; Yudi Zhang; Paul Gadue; Deborah L. French; Karin S. Dorman; Antonella Fidanza; Clyde A. Campbell; Raquel Espin-Palazon
Step 1: iPSC/ESC maintainance
day 0 ~ 1
culture “adherent” human PSC in “StemPro hESC SFM” for “1” days. For ECM, use “Vitronectin” at “N/A” “N/A”. Medium should contain factors shown in the following table, and should be changed once in “1” days.
| concentration | unit | |
|---|---|---|
| FGF | 2.0e-5 | g/l |
| ReLeSR | — | — |
Step 2: Primitive streak 1
day 1 ~ 2 (duration missing in database; assumed 1 day)
culture “spheroid” human PSC in “SFD medium”. Medium should contain factors shown in the following table.
| concentration | unit | |
|---|---|---|
| BMP4 | 1.0e-5 | g/l |
Step 3: mesoderm 1
day 2 ~ 3 (duration missing in database; assumed 1 day)
culture “spheroid” human PSC in “SFD medium”. Medium should contain factors shown in the following table.
| concentration | unit | |
|---|---|---|
| CHIR | 3.0e-6 | mol/l |
| SB431542 | 6.0e-6 | mol/l |
Step 4: endothelial 1
day 3 ~ 8
culture “spheroid” human PSC in “StemPro” for “5” days. Medium should contain factors shown in the following table, and should be changed once in “5” days.
| concentration | unit | |
|---|---|---|
| Nodinitib-1 | 1.5e-5 | mol/l |
| VEGF | 1.5e-5 | g/l |
| FGF | 5.0e-6 | g/l |
| SCF | 1.0e-4 | g/l |
| IGF1 | 5.0e-5 | g/l |
| retinol | 5.0e-6 | mol/l |
Ideally, “EC” should be obtained at the end of culture. Ideally, “HE” should express “RUNX1” at the end of culture.